PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0074s0010.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 155aa    MW: 16403.9 Da    PI: 6.7942
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0074s0010.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.79.5e-211969356
                  AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                         y+GVr+++ +g+++AeIrd   n++  r++lg+f+ta eAa+a+++a+ +++g+
  Kalax.0074s0010.1.p 19 YRGVRRRP-WGKYAAEIRDS--NNQGVRVWLGTFDTALEAARAYDQAAYNMRGA 69
                         9*******.**********4..2345*************************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.4E-151868IPR001471AP2/ERF domain
PROSITE profilePS5103222.841876IPR001471AP2/ERF domain
SMARTSM003803.7E-321882IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.8E-311878IPR001471AP2/ERF domain
CDDcd000184.31E-271976No hitNo description
PRINTSPR003676.7E-111930IPR001471AP2/ERF domain
SuperFamilySSF541713.47E-221977IPR016177DNA-binding domain
PRINTSPR003676.7E-114258IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009789Biological Processpositive regulation of abscisic acid-activated signaling pathway
GO:0010186Biological Processpositive regulation of cellular defense response
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0090332Biological Processstomatal closure
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    Send to blast
MDSSNHVRNS SGGGGEVSYR GVRRRPWGKY AAEIRDSNNQ GVRVWLGTFD TALEAARAYD  60
QAAYNMRGAM AVLNFPKEYK LTPNGAVNNN AASSSGPGRT KEVIEFECLD DQVLEDMLAR  120
DDGPNGFGNV YTGGGGGGSN VHNGNVYSGG GHRL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A4e-241976663ATERF1
2gcc_A4e-241976663ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00029PBMTransfer from AT5G43410Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013659387.12e-40PREDICTED: ethylene-responsive transcription factor ERF096-like
SwissprotQ9LSX06e-35ERF96_ARATH; Ethylene-responsive transcription factor ERF096
TrEMBLA0A151T1818e-41A0A151T181_CAJCA; Ethylene-responsive transcription factor ERF098 family
STRINGGLYMA20G34560.16e-40(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43410.11e-34ERF family protein